In our Getting to know us (a.k.a. Teamsembl) blog series we talk to Ensembl colleagues and ask them a series of questions. In February, we interviewed Natalie Willhoft, who recently took over the role of project leader of the Ensembl Automation team. Join us as we learn more about Natalie’s role, what she did before joining Ensembl and find out the exciting things she does with her family in her freetime.
Continue readingAuthor: Louisse Paola Mirabueno
Getting to know us: Jon from Ensembl Web
In our Getting to know us (a.k.a. Teamsembl) blog series we talk to Ensembl colleagues and ask them a series of questions. To kick off the year, we had the pleasure of interviewing Jon Keatley, who is the project leader of the Ensembl Web team. The Web team is the driving force behind developing, maintaining, and improving the Ensembl websites, including creating user interfaces and data visualisations. Join us as we explore Jon’s journey, the work he is currently involved in and the activities he enjoys with his family outside of work.
Continue readingEnsembl 113 has been released!
We are pleased to announce the release of Ensembl 113, and the corresponding release of Ensembl Genomes 60. This release brings major gene and regulatory feature annotation updates in Homo sapiens (Human) and Mus musculus (Mouse). We have updated existing genomes and added additional genomes across the different Ensembl sites, including livestock breeds in Ensembl, three new species in Ensembl Plants and 26 new species in Ensembl Metazoa. Can’t find the species you are looking for? Don’t forget that new and exciting genome assemblies and annotations are continuously added to Ensembl Rapid Release!
Continue readingWhat’s coming in Ensembl release 113 / Ensembl Genomes 60?
We expect to release Ensembl 113 and Ensembl Genomes 60 in September October 2024. Below is a list of updates that we are hoping to include in the upcoming release. However, please note that we cannot guarantee everything listed here will make it into the final release.
Getting to know us: Reham from Ensembl Havana
In July, we talked to Reham Fatima, a member of the Havana team. The Havana team carry out manual annotation on human, mouse, zebrafish and rat genomes. Reham has contributed to the MANE and GENCODE projects. Read more about Reham’s work at EMBL-EBI and what kind of cuisine she likes the most. You can also see some amazing photographs she has taken in her free time.
Continue readingUpdated gene annotation for Rattus norvegicus (Norway rat)
We have made updates to the Rattus norvegicus (Norway rat) gene annotation. The GRCr8 assembly is now the reference and mRatBN7.2 has been enhanced with manual annotation.
Continue readingGetting to know us: Ian Tsang (visiting PhD student)
Meet visiting PhD student Ian Tsang, who is doing a three-month work experience placement with the Ensembl Plants team. We talked all about his PhD, what projects he is working on during his time in Ensembl and what he does during his free time.
Continue readingIntegration of AlphaMissense scores into Ensembl
We’re excited to announce the integration of AlphaMissense pathogenicity scores into Ensembl! The display of AlphaMissense data in Ensembl and other EMBL-EBI resources aims to empower scientists to gain new insights, expand the exploration of genetic variation and the tolerance to change of different regions in proteins.
Continue readingGetting to know us: Swati from Ensembl Genebuild
We are back with our Getting to know us (a.k.a. Teamsembl) blog series after a short hiatus in March. For the month of April, we got the chance to Swati Sinha who is a senior bioinformatician in the Ensembl Genebuild team. The Genebuild team is in charge of the Ensembl automatic annotation pipeline. Read all about Swati and have a look at the amazing photographs she has taken during her travels.
Continue readingGetting to know us: Gabriela from Ensembl Regulation
In February, we talked to Gabriela Alejandra Merino from the Ensembl Regulation team. Before joining EMBL-EBI, Gabriela worked on protein function prediction. She is now involved in producing regulatory annotations for Ensembl. Outside of work, Gabriela is very active and participates in swimming competitions. Read on to get to know Gabriela and her work.
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